| 文件 | 最后提交记录 | 最后更新时间 |
|---|---|---|
Migrated from fixed seed to fixed state | 1 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixed #1175 Migrate tests/test_aamp.py to npt.assert_allclose (#1178) * Migrate tests/test_aamp.py from npt.assert_almost_equal to npt.assert_allclose npt.assert_almost_equal only checks a fixed absolute tolerance, and NumPy's docs recommend assert_allclose instead. Every comparison in this file is against `ref_mp`/`comp_mp` (or a column slice of it), which combine a float distance column with int index columns and so come back dtype=object - np.isclose can't handle that directly. Cast both sides to float64 before comparing instead of leaving these on the deprecated API; the values are always numeric so the cast is exact. rtol is left at its default rather than pinned to 0. First of a per-file split of #1175, per review feedback. * Addressed comments Flip npt.assert_allclose args so the stumpy-computed value is `actual` (1st) and naive is `desired` (2nd), and use a literal atol (1.5e-05) instead of a computed 1.5 * 10**-config.STUMPY_TEST_PRECISION expression for consistency. Also drops the now-unused config import. * Addressed comments Keep the reference to config.STUMPY_TEST_PRECISION instead of hardcoding its current value as a literal atol. * Addressed comments Rename comp_mp to cmp_mp so ref and cmp are both three letters. | 1 个月前 | |
Migrated from fixed seed to fixed state | 1 个月前 | |
Fixed #1175 Migrate tests/test_aamp_motifs.py to npt.assert_allclose (#1181) * Migrate tests/test_aamp_motifs.py from npt.assert_almost_equal to npt.assert_allclose * Addressed comments Rename left/right to ref/cmp for consistency, and flip assert_array_equal argument order to match the actual, desired convention. | 1 个月前 | |
Migrate tests/test_aamp_ostinato.py from npt.assert_almost_equal to npt.assert_allclose (#1182) | 1 个月前 | |
Migrate tests/test_aamp_stimp.py from npt.assert_almost_equal to npt.assert_allclose (#1183) | 1 个月前 | |
Migrate tests/test_aampdist.py from npt.assert_almost_equal to npt.assert_allclose (#1184) | 1 个月前 | |
Migrate tests/test_aampdist_snippets.py from npt.assert_almost_equal to npt.assert_allclose (#1185) | 1 个月前 | |
Migrate tests/test_aamped.py from npt.assert_almost_equal to npt.assert_allclose (#1186) | 1 个月前 | |
Migrate tests/test_aampi.py from npt.assert_almost_equal to npt.assert_allclose (#1187) | 1 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixed #495 Reduce Import Time (Lazy Imports) (#1122) * Initial attempt at lazy loading * Fixed function/class vs module autocomplete priority * Added numba-cuda to CI requirements * Made suggested changes | 7 个月前 | |
Fix fasthmath precision issue (#1048) * removed reassoc flag from fastmath * Add reset feature to config * Revised config value * replaced fastmath flags with config var * fixed format * Removed bad f-string * Replaced Raised with Returns in docstring * Add second attempt for assertion * minor change * Add condition to avoid revising fastmath when JIT is disabled * Removed support for input with type list to simplify function * Refactored the recompile process * removed blank lines * fixed typo * replaced hardcoded fastmath value with config var * revised function * renamed variable to improve readability * fixed bug * rename config to improve readability * revise func clear * revise func to recompile all njit functions * Adapt to changes in test function * add test * resolve coverage * resolve missing lines in coverage * Add test function to improve coverage * add fastmath module * revise test function to use fastmath module * fix minor issue * minor change to improve readability * Add fastmath default flags to config default * add reset function * rename function * adapt recent changes in test function * minor fixes * Check if DISABLE_JIT before getting fastmath * ignore lines for coverage check * Editorial fix * avoid .get(key) to get KeyError if it does not exist * add function to save cache * Add note to function * fix format * replace fastmath flag with config variable * add test function to check backward compatibility * skip test when JIT is disabled * rename test function * add conditional deprecation warning * add test function to check if cache can be saved after cache._clear() * remove old warning * add test for cache._clear * add wrapper around private functions * Raise OSError when NUMBA JIT is disabled during cache save * move warnings to public API * fix warning message * improved warning message * Add commit about addition config variables that are defined in __init__ * Revise test function to improve readability * Add test function for fastmath * Revised test functions * skip test if numba JIT is disabled * omit test functions that require NUMBA JIT * Removed the trivial test function * Raise warning instead of error to avoid interrupting the program * improve readability * remove intermediate variable * minor fixes * Add shell script code to check for harcoded fastmath flags * minor fix on indention | 1 年前 | |
Migrate tests/test_core.py to npt.assert_allclose (#1188) * Migrate tests/test_core.py from npt.assert_almost_equal to npt.assert_allclose * Addressed comments Switch cmp/ref order for assert_array_equal calls, and convert the isconstant comparison to assert_allclose. Also fixed the jagged_list_to_array tests, which had the same ref-vs-computed comparison under left/right naming. | 1 个月前 | |
Fixed #1116 Avoid Importing Fastmath Functions (#1117) | 7 个月前 | |
Migrate tests/test_floss.py from npt.assert_almost_equal to npt.assert_allclose (#1189) | 1 个月前 | |
Migrate tests/test_gpu_aamp.py from npt.assert_almost_equal to npt.assert_allclose (#1190) | 1 个月前 | |
Migrate tests/test_gpu_aamp_ostinato.py from npt.assert_almost_equal to npt.assert_allclose (#1191) | 1 个月前 | |
Migrate tests/test_gpu_aamp_stimp.py from npt.assert_almost_equal to npt.assert_allclose (#1192) | 1 个月前 | |
Migrate tests/test_gpu_aampdist.py from npt.assert_almost_equal to npt.assert_allclose (#1193) | 1 个月前 | |
Migrate tests/test_gpu_mpdist.py from npt.assert_almost_equal to npt.assert_allclose (#1194) | 1 个月前 | |
Migrate tests/test_gpu_ostinato.py from npt.assert_almost_equal to npt.assert_allclose (#1195) | 1 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Migrated from fixed seed to fixed state | 1 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Migrated from fixed seed to fixed state | 1 个月前 | |
Fixed #495 Reduce Import Time (Lazy Imports) (#1122) * Initial attempt at lazy loading * Fixed function/class vs module autocomplete priority * Added numba-cuda to CI requirements * Made suggested changes | 7 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Migrated from fixed seed to fixed state | 1 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Migrated from fixed seed to fixed state | 1 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Migrated from fixed seed to fixed state | 1 个月前 | |
Migrated from fixed seed to fixed state | 1 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Migrated from fixed seed to fixed state | 1 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Migrated from fixed seed to fixed state | 1 个月前 | |
Add pyfftw sdp (#1132) * add pyfftw sdp and check for fftw/pyfftw * fixed coverage * addressed comments * improved readability * improved docstring * add more comments * minor change * improved comment * fixed flake8 * minor change * empty commit * revise condition for checking pyffftw * add param to change dtype and check multi-thresding * fixed coverage * addressed comments * remove instance of class from stumpy module * addressed comments * pass default value when creating an instance * replace class with closure (help from AI) * updated logic for excluding pyfftw from coverage when unavailable * fixed black formatting * add function to allow user to reset max_n * add comment at top to describe module * fixed docstring and comments * addressed comment * minor changes in docstring * minor changes * rename variable to improve readability * minor changes * address comments * revised comment * modified comments to add clarity * minor changes * fixed isort * avoid checking for fftw | 1 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 | |
Fixes #1153, Fixes 707 Track Random Seed (#1154) * Initial commit * Changed dtype * Added scraamp-related files * Completed up to test_aampi.py * Completed seed tracking for all modules * Force histogram distribution to use custom RNG * Added no cover * Addressed comments * Added STUMPY_SEED support | 2 个月前 |
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