#! /bin/bash
set -eu
PAPERMILL_ARGS=()
OUTPUT_DIR=$PWD
while [[ $# -gt 0 ]]; do
case $1 in
--notebook)
NOTEBOOK="$2"
shift
shift
;;
--output-dir)
OUTPUT_DIR="$2"
shift
shift
;;
--output-name)
OUTPUT_NAME="$2"
shift
shift
;;
*)
PAPERMILL_ARGS+=("$1")
shift
;;
esac
done
if [ -z ${NOTEBOOK+x} ]; then
echo "Usage: $0 --notebook NOTEBOOK [--output-dir OUTPUT_DIR] [--output-name OUTPUT_NAME] [PAPERMILL_ARGS]"
exit 0
fi
BASEDIR=$(dirname $0)
echo "Script location: ${BASEDIR}"
nbname=$(basename $NOTEBOOK .ipynb)
if [ -z ${OUTPUT_NAME+x} ]; then output_name=$nbname; else output_name=$(basename $OUTPUT_NAME .ipynb); fi
output_dir=$(realpath $OUTPUT_DIR)
mkdir -p $output_dir
rename_append_appid() {
output_name=$1
orig_nb=$2
output_appid=`grep "appid: " $orig_nb | awk -F' ' '{print $2}' | sed 's/....$//'`
if [ -n "$output_appid" ];
then
rename_nb=${output_dir}/${output_name}-${output_appid}.ipynb
echo "Rename notebook $orig_nb to $rename_nb"
mv $orig_nb $rename_nb
fi
}
run() {
output_name=${output_name}-$(date +"%H%M%S")
output_nb=${output_dir}/${output_name}.ipynb
papermill --inject-output-path $NOTEBOOK \
${PAPERMILL_ARGS[@]} \
$output_nb
rename_append_appid $output_name $output_nb
}
run